Dataset features

Specifications


Application: aCGH data analysis
Number of samples: 26
Release date: Jun 24 2010
Last update date: Mar 22 2012
Access: Public
Diseases: Adenocarcinoma, Neoplasms, Stomach Neoplasms
Genes: CDK6, EGFR
Dataset link Genomic profiling of gastroesophageal adenocarcinoma

Experimental Protocol


Three types of gastroesophageal adenocarcinomas; 7 distal esophageal (EA) tumors, 9 junctional (JA) and 7 proximal stomach cancers (GA) was genomically profiled using tiling 32k BAC-arrays. Two replicates of tumors IDs 1-EA-CGH (replicate 1-EA-CGH-2), 12-EA-CGH (replicate 12-EA-CGH-2) and 18-EA-CGH (replicate 18-EA-CGH-2). Reference samples consist of a pool of male DNA (Promega, Madison, WI, USA).

Repositories


GEO

GSE22524

ArrayExpress

E-GEOD-22524

BioProject

PRJNA128593

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Contact


Anna Ekstrand
Anna Isinger Ekstrand