Dataset features

Specifications


Application: RNA-seq analysis, sRNA-seq analysis
Number of samples: 5
Release date: Feb 18 2014
Last update date: Jan 23 2018
Access: Public
Diseases: Melanoma, Neoplasms
Mutations: c|SUB|C||G, rs2910164
Dataset link miR-146a promotes the initiation and progression of melanoma by activating Notch signaling

Experimental Protocol


WI-38 cells were either infected with BRAFV600E or Empty retroviral vectors and small RNA were prepared from these cells. As an additional control, WI-38 cells were serum starved and used to generate quiscent cells, which were also used to prepase small RNA. The small RNA were then used to generate small RNA library and were used on Illumina genome analyzer.

Repositories


GEO

GSE39983

ArrayExpress

E-GEOD-39983

ENA

SRP014754

BioProject

PRJNA172202

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Contact


narendra wajapeyee

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