Dataset features

Specifications


Application: ATAC-seq analysis
Number of samples: 29
Release date: Dec 26 2016
Last update date: Nov 28 2018
Access: Public
Taxon: Homo sapiens
Dataset link Variable chromatin secondary structures in live cells revealed by radiation-induced spatially correlated DNA cleavage mapping [RICC-Seq]

Experimental Protocol


This data set includes three biological replicates of primary RICC-seq experiments, one size-selected RICC-seq experiment, one crosslinked RICC-seq experiment, and one ATAC-seq experiment. Each RICC-seq data set consists of one experimental library (300 gy) and two types of controls (0 gy (no irradiation) and purified DNA from lysed cells). The number of technical replicates for each condition varies between experiments.

Repositories


GEO

GSE81806

ENA

SRP075642

BioProject

PRJNA322621

Download