Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 360
Release date: Mar 18 2010
Last update date: Aug 10 2018
Access: Public
Diseases: Bacterial Infections, Pharyngitis, Pneumococcal Infections, Mucositis
Dataset link Interactome analysis of longitudinal pharyngeal infection of cynomolgus macaques by group A Streptococcus

Experimental Protocol


Longitudinal pharyngeal infection of cynomolgus macaques by group A Streptococcus Briefly, animals were GAS-culture negative and had negligible antistreptolysin O titers, indicating no recent history of GAS exposure. Twenty animals were subjected to a mock-inoculation protocol (PBS only) for 5 weeks, rested for 4 weeks, and inoculated in the upper respiratory tract with 107 CFUsMGAS5005. Blood, saliva, and throat swabs were collected on days 0, 1, 2, 4, 7, 9, 16, 23, 32, 45, 58, 72, and 86. Only the first nine time-points were studied because specimens collected during days 0 to 32 had matching comparator specimens from the mock-infection protocol. Thirty-two clinical and laboratory parameters were measured by the same veterinarian during mock and infection periods. Array data was only for the tonsil swabs, while blood and saliva used for other tests.

Repositories


GEO

GSE20262

ArrayExpress

E-GEOD-20262

BioProject

PRJNA124227

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Contact


Dan Sturdevant