Dataset features

Specifications


Application: DNA methylation array analysis
Number of samples: 13
Release date: Jan 6 2011
Last update date: Jun 5 2012
Access: Public
Diseases: Breast Neoplasms, Prostatic Neoplasms
Dataset link Role of DNA methylation in FOXA1 cell type-specific recruitment to chromatin

Experimental Protocol


Cells were grown in full media and harvested to prepare genomic DNA used in MeDIP-chip (Weber et al. 2005). For ChIP-chip, cells were cross-linked and processed as in (Carroll et al. 2005). DNA was hybridized to Human Affymetrix tiled array F.

Repositories


GEO

GSE21513

BioProject

PRJNA125969

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Contact


Jérôme Eeckhoute