Computational protocol: Transient fusion and selective secretion of vesicle proteins in Phytophthora nicotianae zoospores

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Protocol publication

[…] Putative dynamins were identified by Pfam domain searches of proteins annotated by the P. parasitica INRA-310 Sequencing Project (http://www.broadinstitute.org/) and analysed with motif identification programs MyHits [http://myhits.isb-sib.ch/, ()], PROSITE [http://prosite.expasy.org/scanprosite/, ()] and NCBI blastp [http://www.ncbi.nlm.nih.gov/, ()]. […]

Pipeline specifications

Software tools MyHits, ScanProsite, BLASTP
Databases Pfam PROSITE ExPASy
Application Protein sequence analysis
Organisms Homo sapiens
Diseases Infection