Dataset features

Specifications


Dataset type: Expression profiling by high throughput sequencing
Number of samples: 30
Release date: Dec 9 2018
Last update date: Feb 15 2019
Access: Public
Dataset link Comparative Transcriptomics Unravels Prodigiosin’s Potential Cancer-Specific Activity Between Human Small Airway Epithelial Cells and Lung Adenocarcinoma Cells

Experimental Protocol


HSAEC, A549 and HCT116 cells derived from American Type Culture Collection (ATCC) were subjected to 1.0µM PG treatment for 24 hours in vitro (biological triplicates). Total RNA was extracted and mRNA was purified with the Illumina® TruSeq® Stranded messenger RNA Sample Prep Kit. The library preparation output which was cDNA fragments were paired-end sequenced at read lengths of 100 nucleotides via the Illumina® HiSeq 2500 (Illumina) platform.

Repositories


GEO

GSE118448

ENA

SRP157585

BioProject

PRJNA485691

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Contact


Bala Davient