Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 6
Release date: Jul 6 2015
Last update date: Oct 10 2018
Access: Public
Diseases: Bone Diseases, Osteosarcoma, Tumor Lysis Syndrome
Genes: TP53, STXBP2
Computational protocol: BaseSpace, Bowtie, voom
Dataset link RNA Sequencing Quantitative Analysis of cell lines derived from tumours from two mouse models of human osteosarcoma that recapitulate clinically distinct human osteosarcoma subtypes.

Experimental Protocol


mRNA profiles of cell lines derived from tumours from two genetically engineered mouse models of human osteosarcoma (Osx-Cre p53fl/fl Rbfl/fl and Osx-Cre shRNA TRE-p53.1224 pRbfl/fl) were generated by deep sequencing, in triplicate, using Illumina HiSeq 2000.

Repositories


GEO

GSE58916

ArrayExpress

E-GEOD-58916

ENA

SRP043671

BioProject

PRJNA253921

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Contact


Alistair Chalk
Alistair Morgan Chalk

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