Computational protocol: A New Freshwater Biodiversity Indicator Based on Fish Community Assemblages

Similar protocols

Protocol publication

[…] We retrieved molecular data from three mitochondrial genes from GenBank (cytochrome b, cytochrome oxidase I and ribosomial 16S sub-unit). We inferred the best evolutionary model for each gene using maximum likelihood methods implemented in Paup4 ob10 []. The best model of molecular evolution was obtained using Modeltest based on the AIC criterion [], (for more details see ). […]

Pipeline specifications

Software tools PAUP*, ModelTest-NG
Application Phylogenetics
Organisms Homo sapiens