Computational protocol: Interaction of the GntR-family transcription factor Sll1961 with thioredoxin in the cyanobacterium Synechocystis sp. PCC 6803

Similar protocols

Protocol publication

[…] The procedure for modeling tertiary structures of Sll1961 and the Sll1961-TrxM complex is summarized in Supplementary Fig.  and described in detail in Supplementary Text and Supplementary Table . Three-dimensional structure predictions were performed using the I-TASSER server. Docking predictions were performed using the ZDOCK server. Foldit Standalone was used for manual refinement of predicted structures. […]

Pipeline specifications

Software tools I-TASSER, ZDOCK, Foldit
Applications Miscellaneous, Protein interaction analysis
Organisms Synechocystis sp. PCC 6803
Chemicals Cysteine