Dataset features

Specifications


Application: BS-seq analysis
Number of samples: 2
Release date: Dec 20 2012
Last update date: Oct 18 2018
Access: Public
Chemicals: 5-Methylcytosine
Dataset link Integrated detection of both 5-mC and 5-hmC by high-throughput tag sequencing technology highlights methylation reprogramming of bivalent genes during cellular differentiation [MeDIP_hMeDIP]

Experimental Protocol


We developed a cost-effective and selective method to detect both the hydroxymethylation and methylation status of cytosines in more than 1.8 million MspI sites in the human genome. In order to validate the results generated by this method, we applied MeDIP-seq and hMeDIP-seq to screen H9 human embryonic stem cells in comparison with the newly developed method.

Repositories


GEO

GSE41070

ArrayExpress

E-GEOD-41070

ENA

SRP015855

BioProject

PRJNA175775

Download


Contact


Desheng Gong
Yudong Xia