Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 4
Release date: Jul 11 2013
Last update date: Nov 3 2017
Access: Public
Taxon: Caenorhabditis elegans
Dataset link Snyder_NHR-67_GFP_L3

Experimental Protocol


EXPERIMENT TYPE: CHIP-seq. BIOLOGICAL SOURCE: Strain: OP373(official name : OP373 genotype : unc119(ed3);wgIs373(nhr-67::TY1 EGFP FLAG;unc119 outcross : 0 mutagen : None tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology in Dresden using Tony Hyman's recombineering pipeline. The resulting plasmid was used for bombardment transformation of an unc-119(ed3) strain. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the NHR-67 transcription factor. made_by : Bob Waterston's lab from UW ); Developmental Stage: L3; Genotype: unc119(ed3);wgIs373(nhr-67::TY1 EGFP FLAG;unc119; Sex: Hermaphrodite; EXPERIMENTAL FACTORS: Developmental Stage L3; Target gene nhr-67; Strain OP373(official name : OP373 genotype : unc119(ed3);wgIs373(nhr-67::TY1 EGFP FLAG;unc119 outcross : 0 mutagen : None tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology in Dresden using Tony Hyman's recombineering pipeline. The resulting plasmid was used for bombardment transformation of an unc-119(ed3) strain. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the NHR-67 transcription factor. made_by : Bob Waterston's lab from UW ); temp (temperature) 20 degree celsius

Repositories


GEO

GSE48738

ArrayExpress

E-GEOD-48738

ENA

SRP028467

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Contact


DCC modENCODE