Dataset features

Specifications


Dataset type: Other
Number of samples: 42
Release date: Dec 26 2018
Last update date: Feb 15 2019
Access: Public
Dataset link Carbodiimide reagents for the chemical probing of RNA structure in cells

Experimental Protocol


Chemical probing either in vitro or in cells using reagents including CMC and EDC carbodiimides, with structured RNAs 7SK and Xist either IVT or in mouse, with analysis of reverse transcription termination or mutation frequency induced by modification.

Repositories


GEO

GSE118309

ENA

SRP156766

BioProject

PRJNA485142

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Contact


Matthew Simon