Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 152
Release date: Jul 22 2016
Last update date: Aug 9 2018
Access: Public
Diseases: Brain Neoplasms, Neoplasms, Colorectal Neoplasms
Dataset link Prognostic significance of overexpression of Traf2- and Nck- interacting kinase (TNIK) in colorectal cancer [152 samples]

Experimental Protocol


Gene expression profiles for 152 cancer tissues from colorectal cancer patients were measured by Affymetrix HG-U133 Plus 2.0 arrays. Normalization was performed by robust multi-array average (RMA) method under R 2.12.1 statistical software with affy package from BioConductor. The normalized gene expression levels were presented as log2-transformed values by RMA.

Repositories


GEO

GSE71222

ArrayExpress

E-GEOD-71222

BioProject

PRJNA290629

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Contact


Kaoru Mogushi