Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 24
Release date: Jun 20 2017
Last update date: Sep 19 2017
Access: Public
Computational protocol: Bowtie2, DESeq2, BioVenn
Dataset link Yorkie is required to restrict the injury responses in planarians

Experimental Protocol


control(RNAi) and yki(RNAi) animals at 1 day post-60Gy irradiation were amputated or not (intact). RNA was collected from intact animals and tail fragments at 6, 12, and 24 hours post-amputation. Samples were sequenced to a depth of >20 million reads.

Repositories


GEO

GSE97787

ENA

SRP103921

BioProject

PRJNA382883

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Contact


Bret Pearson

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