Dataset features

Specifications


Application: ChIP-seq analysis, RNA-seq analysis
Number of samples: 16
Release date: Nov 23 2015
Last update date: Oct 10 2018
Access: Public
Genes: GATA3, IL7R, NCR1, CCR6, IL22
Dataset link Group 3 innate lymphoid cells continuously require the transcription factor GATA3 after commitment

Experimental Protocol


To identify GATA3 regulated genes in total ILC3s with RNA-Seq; To identify unique genes expressed by CCR6+ ILC3 or NKp46+ ILC3 and GATA3 regulated genes within these two ILC3 subsets with RNA-Seq; To identify GATA3 direct binding sites in ILC3s, ILC2s and Th2 cells with ChIP-Seq.

Repositories


GEO

GSE71198

ArrayExpress

E-GEOD-71198

ENA

SRP061407

BioProject

PRJNA290564

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