Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 15
Release date: Jun 11 2015
Last update date: Oct 18 2018
Access: Public
Diseases: Neoplasms
Dataset link FOXM1 binds directly to non-consensus sequences in the human genome

Experimental Protocol


15 samples, 40 bp single-ended ChIP-Seq libraries from cell lines with antibody for FOXM1 or expressing GFP-tagged FOXM1 (GFP-FOXM1), either wild type (GFP-FOXM1 WT) and with 2 different point mutations (GFP-FOXM1-HA and GFP-FOXM1-RA respectively). FOXM1: 2 replicates, samples labelled FOXM1_GTX; FOXM1-GFP WT: 5 replicates, samples labelled GFP and WT_GFP_FOXM1; FOXM1-GFP HA: 3 replicates, samples labelled GFP_FOXM1_HA; FOXM1-GFP RA: 2 replicates, samples labelled GFP_FOXM1_RA; input libraries: 3 different inputs for the respective experiments.

Repositories


GEO

GSE60032

ENA

SRP045190

BioProject

PRJNA257307

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Contact


Giovanni Marsico

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