Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 15
Release date: Mar 27 2012
Last update date: Dec 27 2017
Access: Public
Taxon: Magnaporthe oryzae, Oryza sativa
Dataset link Rice gene global expression analysis upon inoculation with different Magnaporthe isolates

Experimental Protocol


RNA were obtained from leaf samples after inoculation of rice 2 week-old plantlets with the following strains: rice isolates Magnaporthe oryzae FR13 and CL367, non-adapted strain BR32, isolated from wheat, and Magnaporthe grisea BR29 isolated from crabgrass. Treated and control (mock) rice leaves (cv. Nipponbare) were collected 24 hours post inoculation. Three biological replicates for each interaction type and the corresponding mock were extracted and analysed independently with the GeneChip® Rice Genome Array.

Repositories


GEO

GSE30941

ArrayExpress

E-GEOD-30941

BioProject

PRJNA146297

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Contact


PAMELA ABBRUSCATO