Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 27
Release date: Apr 28 2017
Last update date: Nov 28 2018
Access: Public
Taxon: Vibrio parahaemolyticus, uncultured marine bacterium, Homo sapiens
Dataset link Cytotoxic Vibrio T3SS1 Rewires Host Gene Expression to Subvert Cell Death Signaling and Activate Cell Survival Networks

Experimental Protocol


Overall 27 samples were analyzed. Each of the 9 conditions was performed in triplicate. There are two sets of reference groups. Group one is unifected cells collected at the end of the time course. Group 2 are cells infected with a non-cytoxic V. para strain (POR4), which does not express a functional T3SS1 and samples of these were collected at each time point indicated.

Repositories


GEO

GSE93783

ENA

SRP096982

BioProject

PRJNA362363

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Contact


Nicole De Nisco