Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 4
Release date: Sep 5 2011
Last update date: Sep 28 2018
Access: Public
Diseases: Neoplasms, Inflammatory Breast Neoplasms
Chemicals: Estrogens
Computational protocol: MACS, CENTDIST, TRANSFAC
Dataset link Cellular reprogramming by the conjoint action of ERalpha, FOXA1 and GATA3 to a ligand-inducible growth state

Experimental Protocol


The analysis of ERalpha, FOXA1, and GATA3 in MCF-7 cancer cells was done by ChIP-seq data obtained either with estradiol (E2) stimulation or without stimulation using vehicle as a control. Using the ERalpha bindings defined by ChIP-seq (GSE23893), FOXA1 bindings (GSE26831), and GATA3 bindings (this Series), we analyzed the enhanceosome effect of the overlapped binding sites from ERalpha, FOXA1 and GATA3.

Repositories


GEO

GSE29073

ArrayExpress

E-GEOD-29073

ENA

SRP006701

BioProject

PRJNA140285

Download


Contact


Guoliang Li

Dataset Statistics

info

Citations per year

Dataset publication