Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 15
Release date: Jan 18 2012
Last update date: Jan 12 2017
Access: Public
Diseases: Infection, Tuberculosis, Tuberculosis, Meningeal
Dataset link Suppressor of cytokine signaling-1 influences bacterial clearance and pathology during the infection with Mycobacterium tuberculosis

Experimental Protocol


Relative gene expressions were determined by normalized intensity values. GeneSpring analysis was performed using the Treg transcriptome data with following comparisons: no GvHD d90 versus no GvHD d150, no GvHD d90 versus acute GvHD, no GvHD d150 versus chronic GvHD, acute GvHD versus chronic GvHD, acute GvHD versus GvHD d90 and chronic GvHD versus GvHD d150 (Figure 2). Cut-off was a transcript fold change of +2 or -2 in at least one comparison. StudentĀ“s t-test was used to identify significant expression changes.

Repositories


GEO

GSE23508

ArrayExpress

E-GEOD-23508

BioProject

PRJNA131081

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Contact


Sabin Bhuju