Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 44
Release date: Nov 30 2017
Last update date: Nov 27 2018
Access: Public
Diseases: Breast Neoplasms, Neoplasms
Chemicals: Estrogens
Computational protocol: FastQC, STAR, Picard, HTSeq, DESeq
Dataset link Stranded RNASeq of human mammary primary tumors ER+ and paired adjacent healthy tissues

Experimental Protocol


22 primary invasive breast cancer carcinoma expressing estrogen receptors and their paired adjacent mammary healthy tissues were analyzed by strand-specific RNA sequencing on a Illumina HiSeq.

Repositories


GEO

GSE103001

ENA

SRP116023

BioProject

PRJNA399721

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Contact


Stephane Wenric

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