Dataset features

Specifications


Application: sRNA-seq analysis
Number of samples: 7
Release date: Jun 1 2017
Last update date: Oct 16 2018
Access: Public
Diseases: Breast Neoplasms, Neoplasms
Chemicals: Estrogens, Nucleotides
Dataset link FOXN3 and SIN3A ChIP-Seq; FOXN3 and IgG iRIP-Seq

Experimental Protocol


The Genome-wide binding profiles of FOXN3 and SIN3A in MCF-7 cells were determined by Chromatin Immunoprecipitation followed by high-throughput sequencing (ChIP-Seq). Besides, the potential lncRNAs that is required for the interaction of the SIN3A complex with FOXN3 were identified by an Improved RNA ImmunoPrecipitation-coupled high-throughput sequencing (iRIP-seq) method with antibodies against FOXN3.

Repositories


GEO

GSE93780

ENA

SRP100560

BioProject

PRJNA362507

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Contact


Wanjin Li