Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 27
Release date: Nov 14 2016
Last update date: Nov 21 2018
Access: Public
Chemicals: Thyroxine
Dataset link Cistromic and gene expression analyses associated with HDAC3, SCAP and SREBP1c in mouse livers

Experimental Protocol


C57Bl/6 mice were injected with adeno-associated virus serotype 8 (AAV8) viruses expressing either GFP (control), HA-nSREBP1c, or Cre. Anti-HDAC3 or anti-HA antibodies were used for ChIP. For inputs, mouse livers lacking HDAC3 were used for HDAC3 ChIPs, and mouse livers expressing GFP were used for HA ChIPs. For gene expression, mice injected with AAV8:GFP were used as controls and indicated floxed mice were injected with AAV8:Cre.

Repositories


GEO

GSE85929

ENA

SRP082562

BioProject

PRJNA339791

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Contact


Manashree Damle