Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 3
Release date: Mar 8 2018
Last update date: Mar 9 2018
Access: Public
Taxon: Oryza sativa
Dataset link A Domestication-Selected Retrotransposon for Quenching Genomic Immunity in Rice [RNA-Seq]

Experimental Protocol


The RNA profiles of two-weeks seedling of WT line 308D and the HUO restrotransposon insertion lines 307T1 (1 copy) and 307T3 (3 copy) were generated by deep sequence dependent on illumina Hiseq2000.

Repositories


GEO

GSE78883

ENA

SRP071139

BioProject

PRJNA314274

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Contact


yiwen Deng