Computational protocol: Deletion of a Gene Encoding a Putative Peptidoglycan-Associated Lipoprotein Prevents Degradation of the Crystalline Region of Cellulose in Cytophaga hutchinsonii

Similar protocols

Protocol publication

[…] The genome sequence of C. hutchinsonii was obtained from the NCBI database. CLUSTALW was used for the multiple alignment of related Pals. T-COFFEE and MUSCLE were applied to verify the CLUSTALW results. BoxShade was a tool to shade multiple alignment files. […]

Pipeline specifications

Software tools Clustal W, T-Coffee, MUSCLE, BoxShade
Applications Nucleotide sequence alignment, Proteome data visualization
Organisms Cytophaga hutchinsonii, Bacteroidetes