Dataset features

Specifications


Application: RNA-seq analysis, BS-seq analysis
Number of samples: 22
Release date: Nov 15 2018
Last update date: Nov 17 2018
Access: Public
Genes: ADCP1, CBX5, Su(var)205
Taxon: Drosophila melanogaster, Arabidopsis thaliana, Schizosaccharomyces pombe, Homo sapiens
Dataset link Multivalent H3K9me2 Reader ADCP1 Functions as a plant HP1 to Maintain Epigenetic Silencing

Experimental Protocol


ADCP1 ChIP performed with GFP antibody using ADCP1-GFP tagged transgenic plants, and Col-0 with no tag as control. H3K9me2 ChIP performed in Col-0 and adcp1-1 mutant and H3 ChIP as positive control. BS-seq perfomed with gDNA of Col-0 and adcp1-1. Total RNAs extracted from Col-0 and adcp1-1 for sequencing.

Repositories


GEO

GSE118063

ENA

SRP156229

BioProject

PRJNA484219

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Contact


QIANWEN SUN