Dataset features

Specifications


Application: sRNA-seq analysis
Number of samples: 8
Release date: Sep 16 2017
Last update date: Nov 19 2018
Access: Public
Diseases: Neoplasms
Computational protocol: Trim Galore!, TopHat, Bowtie2, HTSeq, DESeq2, edgeR, BLAT, GSEA, Metascape
Dataset link CD95L derived si- and shRNAs kill cancer cells through an RNAi mechanism by targeting survival genes [AGOpulldownRNAseq.sm]

Experimental Protocol


Examination of small RNAs (18-23bp) pulled-down with Ago proteins in cells infected with either pLenti or overexpressing CD95L.

Repositories


GEO

GSE101166

ENA

SRP111531

BioProject

PRJNA393832

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Contact


Marcus Peter

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