Dataset features

Specifications


Application: RNA-seq analysis, sRNA-seq analysis
Number of samples: 14
Release date: Sep 21 2017
Last update date: Jan 24 2018
Access: Public
Genes: DICER1, CD302
Dataset link Role of small RNAs in gene dosage regulation in the ciliate Oxytricha trifallax

Experimental Protocol


Datasets: 1) sRNAs from asexually growing O.trifallax cells from WT (mix of strain JRB310 and JRB510), dcl-123, dcl-141, rdrp13. 2) RNAseq from Poly(A) selected RNA from WT (strain JRB310), dcl-141, rdrp13. 3) Whole cell Genomic DNA from WT (strain JRB310), WT (F1 crossed between JRB310 and JRB510), dcl-141, rdrp13

Repositories


GEO

GSE104078

ENA

SRP118382

BioProject

PRJNA408164

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