Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 8
Release date: Jan 13 2016
Last update date: Apr 5 2016
Access: Public
Dataset link Polynucleotide phosphorylase can interact with small noncoding RNAs in both stabilizing and degradative modes

Experimental Protocol


Using cells from the same original culture, immunoprecipitiations using the anti-FLAG M2 resin were performed in the presence or absence of tungstate. Total RNA and immunoprecipitated RNA were sequenced from two independent biological replicates. The number of normalized reads (RPKM) were compared between the total RNA (input) and the immunoprecipitated RNA (output).

Repositories


GEO

GSE69856

ArrayExpress

E-GEOD-69856

ENA

SRP059467

BioProject

PRJNA286969

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Contact


Nicholas De Lay