Dataset features

Specifications


Dataset type: Expression profiling by high throughput sequencing
Number of samples: 13
Release date: Dec 21 2018
Last update date: Feb 19 2019
Access: Public
Dataset link Microglial RNA-sequencing after stress-sensitization by repeated social defeat

Experimental Protocol


Adult (2mo) C57BL/6 mice were subjected to 6 cycles of repeated social defeat (RSD) or controls (CON). At 24d after the final cycle of RSD, RNA was extracted from FAC-sorted microglia (CD11b+/CD45int). RNA sequencing was performed and sequences were aligned with STAR and normalized counts and differential gene expression were determined using DESeq2 in R.

Repositories


GEO

GSE124169

ENA

SRP174018

BioProject

PRJNA510940

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Contact


Kristina Witcher