|Number of samples:||16|
|Release date:||Sep 15 2015|
|Last update date:||Oct 24 2018|
|Diseases:||Bacterial Infections, Colitis, Ulcerative, Colonic Diseases, Mucositis|
|Chemicals:||Amino Acids, Gentamicins|
|Dataset link||RNA-sequencing of mRNAs from control and CAP-D3 deficient Salmonella infected HT-29 cells|
Three RNA samples from 3 independent experiments including timepoints taken at 0, 0.5 and 7 hours post-infection were analyzed on a bioanalyzer for quality; one of the 0.5 hour post-infection samples was excluded at this time due to poor RNA purity. Directional, cDNA libraries made from cellular mRNAs were generated from the other 8 samples and sequenced (paired-end sequencing of 100 bp reads) in the Genomics Core at the University of Chicago on an Illumina HiSeq2000.
Michelle Suzanne Longworth