|Application:||ChIP-seq analysis, RNA-seq analysis|
|Number of samples:||34|
|Release date:||Jun 13 2014|
|Last update date:||Oct 24 2018|
|Dataset link||piRNA pathway targets active LINE1 elements to establish repressive H3K9me3 mark in germ cells|
Total of 34 libraries were analyzed. In case of ChIP libraries, every 'input' sample was used for normalization of the respective ChIP (H3K9me3 or H3) sample; the input libraries preceed ChIP libraries in the list below. There are four replicates (input-ChIP pairs) for H3K9me3 ChIP on liver cells, two for ChIP on testicular somatic cells for each genotype (Miwi2 Het and KO); and four for ChIP on male germ cells for each genotype (one from FACS-sorted germ cells, and three from MACS-sorted germ cells). Each replicate has a Het/KO pair, and the respective libraries were cloned from the material isolated from littermates. One H3 ChIP for each genotype is included, with respective inputs.
Sergei A Manakov