Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 6
Release date: May 1 2008
Last update date: Jan 24 2013
Access: Public
Taxon: Anopheles gambiae
Dataset link The salivary transcriptome of Anopheles gambiae (Diptera: Culicidae) larvae: A microarrray-based study

Experimental Protocol


We attempted to identify transcripts that are both present and significantly enriched in the salivary glands (SG) of the 4th instar Anopheles gambiae larva. Transcripts were considered as present in the SG if the built-in Affymetrix detection call scored them as such in all three biological replicates of the experiment. Expression values (i.e. signal intensities) of transcripts from the salivary glands were compared to those of a matching group of whole 4th instar larvae using a t-test. Transcripts showing an expression value two-fold or higher (p < 0.01; false discovery rate=1%) in the SG as compared to whole larvae were considered to be significantly enriched.

Repositories


GEO

GSE9642

ArrayExpress

E-GEOD-9642

BioProject

PRJNA103503

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Contact


Marco Neira
Marco V. Neira