Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 6
Release date: Aug 4 2014
Last update date: Nov 3 2014
Access: Public
Dataset link RNA-Seq analysis reveals a six-gene SoxR regulon in Streptomyces coelicolor

Experimental Protocol


RNA was obtained from 1-day or 3-day old wild type or soxR null mutant strains grown on R2YE agar complex medium. Biological replicates were obtained for 3 day-old samples. RNA was sequenced in an Illumina HiSeq 2000 sequencer for single reads of 100 bp and mapped to the S. coelicolor M145 genome.

Repositories


GEO

GSE57268

ArrayExpress

E-GEOD-57268

ENA

SRP041654

BioProject

PRJNA246145

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Contact


Joshua Shapiro
Joshua A Shapiro

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