Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 10
Release date: Sep 30 2015
Last update date: Oct 10 2018
Access: Public
Computational protocol: TopHat, Cufflinks, GOseq
Dataset link A specific E3 ligase/deubiquitinase pair modulates TBP protein levels during muscle differentiation

Experimental Protocol


Control and Huwe1 knockdown C2C12 cells were collected on differentiation day 0, day 6 and day 8. Control and USP10 overexpressed C2C12 cells were collected on differentiation day 6. Subsequently, directional mRNA-seq expriments were performed with mRNAs purified from the collected cells.

Repositories


GEO

GSE72105

ENA

SRP062433

BioProject

PRJNA292929

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Contact


Robert Tjian

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