Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 2
Release date: Aug 11 2010
Last update date: Feb 2 2015
Access: Public
Taxon: Drosophila melanogaster
Dataset link modENCODE_White Lab: genome-wide ChIP data of disco from E8-16h on Illumina Genome Analyzer

Experimental Protocol


A validated dataset is comprised of three biological replicates for ChIP-chip experiments and two replicates for ChIP-seq and meet the modENCODE quality standards. The control sample is the chromatin Input used for ChIP. Most factors binding profiles are generated by using specific antibodies for the protein of interest. However, some factors have been tagged by GFP in a transgenic line. In that case, ChIP is generated using an anti-GFP antibody. This submission represents the ChIP-seq component of the study

Repositories


GEO

GSE23237

ArrayExpress

E-GEOD-23237

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Contact


Kevin White
Nick Bild