Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 18
Release date: Jan 16 2014
Last update date: Oct 17 2018
Access: Public
Diseases: Colonic Diseases, Colonic Neoplasms, Neoplasms, Colorectal Neoplasms
Dataset link Obesity, rather than diet, drives epigenomic alterations in colonic epithelium resembling cancer progression

Experimental Protocol


ChIP sequencing of active enhancer mark h3k27ac in colon epithelium from wild type mice and NAG-1 transgenic mice treated with either low-fat diet or high-fat diet. The gene expression component of the study is included in GSE46843.

Repositories


GEO

GSE46748

ArrayExpress

E-GEOD-46748

ENA

SRP022181

BioProject

PRJNA202232

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Contact


ruifang li