Computational protocol: Substrate recognition by two different P450s: Evidence for conserved roles in a common fold

Similar protocols

Protocol publication

[…] The processed TROSY/semi-TROSY data was analyzed using SPARKY, and the measured RDCs translated into AMBER-readable format using macros available from ambertools. All molecular dynamics were performed using the AMBER 16 sander module installed on the XSEDE node Comet (UCSD). The simulation protocols used were identical to those published recently for substrate-bound MycG. […]

Pipeline specifications

Software tools Sparky, AMBER
Application NMR-based proteomics analysis