Dataset features

Specifications


Application: ChIP-seq analysis, RNA-seq analysis
Number of samples: 13
Release date: Feb 24 2014
Last update date: Oct 18 2018
Access: Public
Diseases: Breast Neoplasms, Neoplasms, Tumor Lysis Syndrome
Dataset link Histone variant H3.3-specific readout of H3K36 trimethylation by ZMYND11 links transcription elongation control to tumour suppression

Experimental Protocol


ChIP-seq analysis of ZMYND11, H3K36me3 in U2OS cells and ZMYND11 knockdown cells; ChIP-seq of H3.3 in Flag-H3.3 stable U2OS cells; RNA-seq of ZNYMD11 depleted U2OS cells.

Repositories


GEO

GSE48423

ArrayExpress

E-GEOD-48423

ENA

SRP026454

BioProject

PRJNA210152

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Contact


Yuanxin Xi