Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 16
Release date: Jun 15 2015
Last update date: Jun 15 2015
Access: Public
Chemicals: Nitrogen, Oxygen, Riboflavin
Dataset link Genome Profiling of Two Black Poplar (Populus nigra L.) Genotypes Differentially Adapted To Drought Stress Indicated Adaptation-Specific Transcripts

Experimental Protocol


For Microarray experiment total RNA was isolated from the leaves randomly selected from two balck poplar seedlings (two biological replicates) for resistant and sensitive genotypes at well watered period (WWP), moderate drought (MD), severe drought (SD) and post drought rewatering (PDR) periods. For each water availability regime total isolated RNA was loaded onto two Affymetrix poplar Gene Chips for each genotype. Totally 16 Affymetrix poplar GeneChips (2 genotypes × 4 water availability regimes × 2 biological replicates) were used for transcriptional analysis.

Repositories


GEO

GSE69875

ArrayExpress

E-GEOD-69875

BioProject

PRJNA287012

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Contact


KUBILAY YILDIRIM