Dataset features

Specifications


Dataset type: Expression profiling by high throughput sequencing, RNA-seq of coding RNA, Transcriptome or Gene expression
Number of samples: 21
Release date: Jan 10 2013
Last update date: May 16 2014
Access: Public
Diseases: Nematode Infections
Chemicals: Salicylic Acid, Carbohydrates, Amino Acids
Dataset link Transcriptional reprogramming by root knot and migratory nematode infection in rice

Experimental Protocol


2 or 3 biological replicates of nematode infected roots and root tips and their respective controls were sampled at two time points (1 biological replicate contains pooled tissue from 6 plants)

Repositories


GEO

GSE35843

ArrayExpress

E-GEOD-35843

ENA

SRP010960

BioProject

PRJNA151855

Download


Contact


Simon Lieven Imanuel Johan Denil