Workflow

Leon-NoveloEtAl2014

Enables analysis of allelic imbalance. This approach consists of a Bayesian PoissonGamma (PG) model. It can be used when DNA controls are not available through use of a parameter representing bias which is incorporated into the structure of the model. This method is flexible and can accommodate differences in experimental design and bias estimation.

Leon-NoveloEtAl2014 specifications

Algorithm

Information

Unique identifier	OMICS_06045
Name	Leon-NoveloEtAl2014

Maintainer

This tool is not maintained anymore.

Publication for Leon-NoveloEtAl2014

A flexible Bayesian method for detecting allelic imbalance in RNA-seq data.

2014 BMC Genomics

PMCID: 4230747

PMID: 25339465

DOI: 10.1186/1471-2164-15-920

Leon-NoveloEtAl2014 institution(s)

Department of Mathematics, University of Louisiana at Lafayette, Lafayette, LA, USA; Department of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL, USA; Department of Biological Sciences, Auburn University, Auburn, AL, USA

Leon-NoveloEtAl2014 funding source(s)

Supported by NIH 5R01GM102227.

Leon-NoveloEtAl2014 reviews

Be the first to review Leon-NoveloEtAl2014