Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 8
Release date: Sep 18 2017
Last update date: Sep 18 2017
Access: Public
Diseases: Airway Obstruction
Dataset link Identification of FOXJ1 effectors during ciliogenesis in the fetal respiratory epithelium and embryonic left-right organizer of the mouse - IMCD3 screen

Experimental Protocol


Microarray experiments were conducted in dual-colour mode using amplified, fluorescently-labelled material from unstarved vs. starved cultured IMCD3 cells. Experiments were performed twice as true biological replicates (4 samples). Each pair (unstarved vs. starved) was used for dual-colour based co-hybridisation, including a technical dye-swap replicate, resulting in four dual-colour microarray hybridisations in total. In order to enable inspection of intensity values, dual-colour results were integrated into a single-color GEO matrix.

Repositories


GEO

GSE89584

BioProject

PRJNA352629

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Contact


Oliver Dittrich-Breiholz