Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 156
Release date: Dec 31 2017
Last update date: Aug 14 2018
Access: Public
Diseases: Colorectal Neoplasms
Dataset link Gene expression data from stage II and III treated and untreated colorectal cancer patients

Experimental Protocol


The colorectal cancer cohort was assembled from 363 stage II and III patients from 4 European Centres (Barcelona, Dublin, Florence, Aberdeen). Within this cohort, samples from 194 patients with 50% or more tumour content as assessed by Hematoxylin and eosin (H&E ) staining were taken forward for RNA and DNA extraction. High quality transcriptomics data were obtained for 156 samples using the Almac Xcel array (Almac Diagnostics, Craigavion, UK).

Repositories


GEO

GSE103479

BioProject

PRJNA401787

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Contact


Wendy Allen