Dataset features

Specifications


Application: aCGH data analysis
Number of samples: 2
Release date: Jul 6 2015
Last update date: Jul 6 2015
Access: Public
Diseases: Fanconi Anemia, Medulloblastoma, Pleural Effusion, Malignant
Mutations: c|DEL|6174|T
Dataset link Disseminated medulloblastoma in a child with germline BRCA2 6174delT mutation and without Fanconi anemia

Experimental Protocol


Continuous medulloblastoma cell lines were isolated from the original tumor (CHLA-01-MED) and the malignant pleural effusion (CHLA-01R-MED). Here we provide their analyses, including in vitro and in vivo growth, drug sensitivity, comparative genomic hybridization with Agilent 400k CGH arrays and whole transcriptome RNASeq analysis.

Repositories


GEO

GSE70003

ArrayExpress

E-GEOD-70003

BioProject

PRJNA287447

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Contact


Michael Barrett
Michael Thomas Barrett