Computational protocol: Characterization of Flavin-Containing Opine Dehydrogenase from Bacteria

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Protocol publication

[…] Protein sequences were analyzed using the Protein-BLAST and Clustal W program distributed by DDBJ (DNA Data Bank of Japan) ( The phylogenetic tree was produced using the TreeView 1.6.1. program. […]

Pipeline specifications

Software tools DELTA-BLAST, Clustal W, TreeViewX
Databases DDBJ
Applications Phylogenetics, Amino acid sequence alignment
Organisms Pseudomonas putida, Bradyrhizobium japonicum
Diseases Neoplasms
Chemicals Arginine, NADP, 2,6-Dichloroindophenol, Pyruvic Acid