Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 2
Release date: Dec 16 2011
Last update date: Feb 2 2015
Access: Public
Taxon: Drosophila melanogaster
Dataset link modENCODE_White Lab: genome-wide ChIP data of en from W3L on Illumina Genome Analyzer

Experimental Protocol


A validated dataset is comprised of three biological replicates for ChIP-chip experiments and two replicates for ChIP-seq and meet the modENCODE quality standards. The control sample is the chromatin Input used for ChIP. Most factors binding profiles are generated by using specific antibodies for the protein of interest. However, some factors have been tagged by GFP in a transgenic line. In that case, ChIP is generated using an anti-GFP antibody. This submission represents the ChIP-seq component of the study.Series_contributor = Nicholas,A,Bild

Repositories


GEO

GSE34377

ArrayExpress

E-GEOD-34377

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Contact


Kevin White
Jason Grundstad