Dataset features

Specifications


Application: BS-seq analysis
Number of samples: 6
Release date: Jul 30 2013
Last update date: Sep 28 2018
Access: Public
Diseases: Leigh Disease, Neoplasms, Pancreatic Neoplasms
Chemicals: 5-Methylcytosine
Computational protocol: ELAND, GSNAP, HTSeq, edgeR
Dataset link Genome wide hydroxymethylation tested using the HELP-GT assay shows redistribution in cancer

Experimental Protocol


We did methylation and hydroxymethylation tests for one control and two pancreatic cancer cases

Repositories


GEO

GSE42723

ArrayExpress

E-GEOD-42723

ENA

SRP017412

BioProject

PRJNA182946

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