Dataset features

Specifications


Application: BS-seq analysis
Number of samples: 13
Release date: Sep 1 2016
Last update date: Oct 24 2018
Access: Public
Diseases: Breast Neoplasms, Hypoxia, Brain, Neoplasms
Chemicals: Oxygen, 5-Methylcytosine
Dataset link Tumor hypoxia causes DNA hypermethylation by reducing TET activity (TAB-Seq)

Experimental Protocol


Shallow tet-assisted-bisulfite-sequencing of tumors with a normalized or truncated vasculature to assess global differences in 5hmC levels

Repositories


GEO

GSE71402

ENA

SRP061652

BioProject

PRJNA291092

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